Gå direkt till huvudinnehåll
Researchdata.se
ℹ️ Detta är en preview-version av Researchdata.se, innehåll och funktionalitet är under utveckling.

CO1 Amplicon Sequence Variants of bulk arthropod samples (homogenized) collected with Malaise traps from the Insect Biome Atlas project in Sweden

CO1 Amplicon Sequence Variants of bulk arthropod samples (homogenized) collected with Malaise traps from the Insect Biome Atlas project in Sweden
https://doi.org/10.15468/AWJYCD
Amplicon Sequence Variants of 418bp of CO1 from homogenized arthropod community samples collected with Malaise traps from the Insect Biome Atlas project (https://www.insectbiomeatlas.orgÖppnas i en ny tabb) in Sweden, as described in the IBA data paper (https://doi.org/10.1038/s41597-025-05151-0Öppnas i en ny tabb) . This dataset was published via the SBDI ASV portal (https://asv-portal.biodiversitydata.seÖppnas i en ny tabb) , and has been updated from 'Metadata only' to 'Occurrence' type. Occurrence data were compiled from the following IBA Figshare items: Processed ASV data from the Insect Biome Atlas Project v3: (https://figshare.scilifelab.se/articles/dataset/Processed_ASV_data_from_the_Insect_Biome_Atlas_Project/27202368/3Öppnas i en ny tabb) - cleaned_noise_filtered_cluster_taxonomy_SE.tsv.gz (https://figshare.scilifelab.se/ndownloader/files/50067528Öppnas i en ny tabb) - spikeins_tax_SE.tsv.gz (https://figshare.scilifelab.se/ndownloader/files/50067531Öppnas i en ny tabb) Amplicon sequence variants from the Insect Biome Atlas project v6: (https://figshare.scilifelab.se/articles/dataset/Amplicon_sequence_variants_from_the_Insect_Biome_Atlas_project/25480681/6Öppnas i en ny tabb) - co1_asv_counts_se.tsv.gz (https://figshare.scilifelab.se/ndownloader/files/46381132Öppnas i en ny tabb) - co1_asv_seqs_se.fasta.gz (https://figshare.scilifelab.se/ndownloader/files/46381138Öppnas i en ny tabb) The following samples were excluded from this resource due to low read counts: P28409_1377, P28409_1378, P28409_1379, P28409_1380, P28409_1382, P28409_1383, P28410_1334, P28410_1392; or lack of non-zero counts for annotated ASVs: P27361_1636, P28410_1037, P28410_1049.
Gå till källa för data
Öppnas i en ny tabb
https://doi.org/10.15468/AWJYCD

Citering och åtkomst

Geografisk täckning

Administrativ information

Ämnesområde och nyckelord

Metadata

gbif-sweden
Naturhistoriska riksmuseet