Gene annotation of Linum tenue
https://doi.org/10.17044/SCILIFELAB.24340378
The file contains the gene annotation of Linum tenue genome.
The genome has been deposited to ENA with the accession id: GCA_946122785 (Project PRJEB52918). See link below.
The gene annotation has been done with MAKER (https://www.yandell-lab.org/software/maker.htmlOpens in a new tab) by NBIS. The genes contained in the S-locus region has been manually annotated using StringTie (https://ccb.jhu.edu/software/stringtieOpens in a new tab) and TransDecoder (https://github.com/TransDecoderOpens in a new tab).
It is part of this article: Gutiérrez-Valencia, J., Zervakis, P. I., Postel, Z., Fracassetti, M., Losvik, A., Mehrabi, S., ... & Slotte, T. (2024). Genetic causes and genomic consequences of breakdown of distyly in Linum trigynum. Molecular Biology and Evolution, msae087. https://doi.org/10.1093/molbev/msae087Opens in a new tab
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Opens in a new tabhttps://doi.org/10.17044/SCILIFELAB.24340378
Citation and access
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Creator/Principal investigator(s):
- Tanja Slotte - Science for Life Laboratory
- Juanita Gutiérrez-Valencia
- Panagiotis-Ioannis Zervakis
- Zoé Postel
- Aleksandra Losvik
- Sara Mehrabi
- Ignas Bunikis
- Lucile Soler
- Aurélie Désamoré - Stockholm University
- Benjamin Laenen - Stockholm University
- Mohamed Abdelaziz
- Olga Vinnere Pettersson
- Juan Arroyo
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Citation:
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