High-throughput measurement of the content and properties of nano-sized bioparticles with single-particle profiler
https://doi.org/10.17044/SCILIFELAB.20338869
This item containst data sets for Sych et al, Nature Biotechology, 2023.
It contains raw fluroescence fluctuation data as excle sheet and raw figure files.
Abstract:
We introduce a method, single-particle profiler (SPP), that provides single-particle information on the content and biophysical properties of thousands of particles in the size range 5-150 nm. We apply SPP to measure the mRNA encapsulation efficiency of lipid nanoparticles, viral binding efficiency of different nanobodies, and biophysical heterogeneity of liposomes, lipoproteins, exosomes and viruses.
Data usage
Researchers are welcome to use the data contained in the dataset for any projects. Please cite this item upon use or when published. We encourage reuse using the same CC BY 4.0 License.
Data Content
FCS files as raw data (.fcs)
Excel and Prism files for graphs
# Software to open files:
.xlsx: Microsoft Excel
.pzfx: GraphPad Prism
.svg: Inkscape (https://inkscape.orgOpens in a new tab)
.fcs: Single Particle Profiler (https://github.com/taras-sych/Single-particle-profilerOpens in a new tab)
.ipynb: Jupyter Notebook, installed as part of anaconda platform, python 3.8.8 (https://www.anaconda.comOpens in a new tab)
.py: executed via anaconda platform, python 3.8.8 (https://www.anaconda.comOpens in a new tab)
Go to data source
Opens in a new tabhttps://doi.org/10.17044/SCILIFELAB.20338869
Citation and access
Citation and access
Creator/Principal investigator(s):
- Taras Sych - Science for Life Laboratory
- Jan Schlegel - Science for Life Laboratory
- Hanna Barriga
- Miina Ojansivu
- Leo Hanke
- Florian Weber
- R. Beklem Bostancioglu
- Kariem Ezzat
- Herbert Stangl
- Birgit Plochberger
- Jurga Laurencikiene
- Samir El Andaloussi
- Daniel Furth
Research principal:
Citation:
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